The subject of the specialization of Plant Protection encompasses the field of management of plant pests and diseases with emphasis in integrated pest management and proper use of pesticides. The educational and research areas of the specialization include: 1) entomology (Acarology, Nematology), 2) plant pathology (Mycology, Virology), 3) chemistry and ecology of pesticides and integrated pest management.

Apart from the skills related to general agricultural education, the graduates of the specialization obtain background on: 1) the identification and management of pests (insects, mites, nematodes, fungi, bacteria and viruses) on plants, plant products and humans 2) the chemistry, toxicology and use of pesticides, and 3) the protection of non-target organisms and the environment from pesticide residues.

The Plant Protection department includes three laboratories.